Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907590.1_cds_XP_016457690.1_51389
CDS Infomation

[gene=LOC107781494] [db_xref=GeneID:107781494] [protein=calcium-dependent protein kinase 32-like] [protein_id=XP_016457690.1] [location=complement(join(74214..74369,74483..74713,75204..75371,75531..75646,75756..75908,76795..76938,77018..77141,77445..77942))] [gbkey=CDS]
Sequence

ATGGGAAATTGTTGTGCGGTACCTAGTACTACTGATATAGATGAGCAGAAAAGGGGAAAA
AATAAACCAAATCCATTTTCTACGCATAATCATGGAAATGGTGGGTGCAAATCCTATGTG
TTGGAAAATCCAACAGGTCATGATATTGAGACCACATATGAACTAGGACGTGAGCTTGGC
AGAGGTGAATTTGGGGTTACATATTTATGTACTGAGAAATCTACAGGTGAATTTTATGCT
TGTAAATCAATATCCAAGAAGAAGCTAAGGACTAGAATAGATATTGAGGATGTGAGGAGA
GAGGTTGAGATTATGAAGAATTTGCCTCAGCATCCTAATATTGTTACCTTAAAGGATACT
TATGAGGATGATATTGCAGTTCATTTAGTGATGGAGTTGTGTGAGGGTGGTGAGCTCTTT
GATCGGATTGTCACGAGGGGGCATTATACTGAGAGGGCTGCAGCAGCTGTGACTCGCACT
ATTGTCGAAGTAATTCAGATGTGCCATAAGCATGGTGTCATGCATCGGGATCTCAAACCT
GAAAATTTCTTGTTCGGAAACAAGAAGGAAACAGCACCACTGAAGGCAATTGATTTTGGG
CTCTCAGTATTCTTTAAGCCTGGAGAGAGATTTAATGAGATTGTGGGAAGTCCCTATTAC
ATGGCTCCTGAGGTGTTGAAGCGAAACTATGGTCCAGAAGTAGATGTATGGAGTGCTGGA
GTCATTCTTTACATCTTGCTATGTGGTGTCCCACCCTTTTGGGCAGAAACTGAACAAGGA
GTTGCTCAAGCGATCATTCGATCTGTTGTGGATTTTAGAAGAGATCCTTGGCCAAAGGTC
TCTGATAATGCAAAGGACCTTGTGAAGAAGATGCTCAACCCTGACCCTAGCAAGAGGCTT
ACTGCTCAGGAAGTGCTAGATCATCCTTGGATACAAAATGCTAAAAGGGCGCCAAATGTT
TCTCTCGGTGAAACAGTGAAAGCAAGGCTCAAGCAATTTTCTATGATGAACAAGCTTAAG
AAAAGAGCTTTAAGGGTTATTGCTGAGCATTTGTCTGTGGAGGAGGTGGCTGGAATAAAG
GAGGGATTCAAATTGATGGACATAGGAAACAAAGGGAAGATTGACATGAATGAGTTGAAA
GTTGGATTGCAGAAGCTTGGACATCAAGTCCCAGATACTGACGTACAAATTCTAATGGAT
GCTGGCGATGTTGATAAAGATGGATATCTGGACTATGGGGAGTTTGTGGCAATCTCAGTC
CACCTTAGGAAGATGGGCAATGATGAGCACTTGAAGAAGGCATTTGAATTTTTTGATAAG
AACCAAACTGGGTATATAGAGATTGACGAGTTAAGGGAGGCATTATCTGACGAGATTGAA
ACCAACAGTGAAGAAGTTATTAGTGCAATTATGCAAGACGCGGACACGGACAAGGACGGA
CGCATAAGTTTTGATGAGTTTGCTGCAATGATGAAGGCTGGTACAGATTGGAGAAAGGCA
TCACGACAGTATTCACGAGAACGATATAATAGCCTCAGCTTGAAATTGATGAAAGATGGA
TCCTTACATGGGAATGATGATAGTAGATAG

Peptide Sequence

PEP ID

XP_016457690.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 32-like [Nicotiana tabacum]
Sequence

MGNCCAVPSTTDIDEQKRGKNKPNPFSTHNHGNGGCKSYVLENPTGHDIETTYELGRELG
RGEFGVTYLCTEKSTGEFYACKSISKKKLRTRIDIEDVRREVEIMKNLPQHPNIVTLKDT
YEDDIAVHLVMELCEGGELFDRIVTRGHYTERAAAAVTRTIVEVIQMCHKHGVMHRDLKP
ENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDVWSAG
VILYILLCGVPPFWAETEQGVAQAIIRSVVDFRRDPWPKVSDNAKDLVKKMLNPDPSKRL
TAQEVLDHPWIQNAKRAPNVSLGETVKARLKQFSMMNKLKKRALRVIAEHLSVEEVAGIK
EGFKLMDIGNKGKIDMNELKVGLQKLGHQVPDTDVQILMDAGDVDKDGYLDYGEFVAISV
HLRKMGNDEHLKKAFEFFDKNQTGYIEIDELREALSDEIETNSEEVISAIMQDADTDKDG
RISFDEFAAMMKAGTDWRKASRQYSRERYNSLSLKLMKDGSLHGNDDSR

Transcript Sequence

Gene sequence data has not been registered.